Polypeptide MELO3C006121P2
Accession: MELO3C006121P2
Name: MELO3C006121P2
Description: Similar to DEAD-box ATP-dependent RNA helicase 8 (Arabidopsis thaliana) (uniprot_sprot:sp|Q8RXK6|RH8_ARATH)
Sequence:
>MELO3C006121P2 Similar to DEAD-box ATP-dependent RNA helicase 8 (Arabidopsis thaliana) (uniprot_sprot:sp|Q8RXK6|RH8_ARATH) MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQYQQQHQHQQLQQQQQWLKRNQLGGGPADSNVDEVEK TVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILA RAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPANRQILMYSATFPVTVKDFKDRYLHKPYVIN LMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHD FRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ IPPHIDQAIYCR*
Download fasta sequence.
Properties
These properties come from blast2go analysis
molecular_function: ATP-dependent helicase activity, ATP binding, nucleic acid binding.
These properties come from reactome analysis
REACTOME_REACTION: Decapping of mRNA by the DCP1-DCP2 Complex (REACT_98936), Decapping of mRNA by the DCP1-DCP2 Complex (REACT_20560).
biological_process: nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay, RNA metabolic process, exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay, mRNA metabolic process.
REACTOME_COMPLEX: DCP1-DCP2 Decapping Complex [cytosol] (REACT_20836).
REACTOME_PATHWAY: mRNA Decay by 5 to 3 Exoribonuclease (REACT_29037), Metabolism of RNA (REACT_21257), Deadenylation-dependent mRNA decay (REACT_20639), Metabolism of mRNA (REACT_109292), Metabolism of RNA (REACT_92152), Deadenylation-dependent mRNA decay (REACT_89647), Metabolism of mRNA (REACT_20605), mRNA Decay by 5 to 3 Exoribonuclease (REACT_20518).
These properties come from phylome analysis
molecular_function: identical protein binding, protein binding, ATP-dependent RNA helicase activity, RNA helicase activity, RNA binding, ATP-dependent helicase activity, ATP binding, nucleic acid binding.
cellular_component: RNA-induced silencing complex, stress granule, microtubule associated complex, cytosol, cytoplasmic mRNA processing body.
biological_process: germline cell cycle switching, mitotic to meiotic cell cycle, mRNA transport, oogenesis, exonucleolytic nuclear-transcribed mRNA catabolic process involved in deadenylation-dependent decay, hermaphrodite genitalia development, positive regulation of growth rate, growth, stress granule assembly, cytoplasmic mRNA processing body assembly, cell differentiation, negative regulation of translation, mRNA metabolic process, gene expression, embryo development ending in birth or egg hatching, determination of adult lifespan, spermatogenesis, mitotic cell cycle G2/M transition DNA damage checkpoint, mitotic spindle organization, anti-apoptosis, apoptosis, receptor-mediated endocytosis, regulation of translation, mRNA processing, nematode larval development, morphogenesis of an epithelium, cell morphogenesis involved in conjugation with cellular fusion, deadenylation-dependent decapping of nuclear-transcribed mRNA.
These properties come from kegg analysis
COG: Superfamily II DNA and RNA helicases (COG0513).
This polypeptide in other databases
In PhylomeDB is Phy003LJTH_CUCME .
